STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_01465Hypothetical protein; COG1482 Phosphomannose isomerase. (188 aa)    
Predicted Functional Partners:
NA2_01470
COG3435 Gentisate 1,2-dioxygenase.
 
  
 0.990
NA2_01480
Fumarylpyruvate hydrolase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
    
  0.931
NA2_01475
Maleylacetoacetate isomerase; COG0625 Glutathione S-transferase.
    
  0.868
NA2_01485
TRAP transporter, 4TM/12TM fusion protein; COG4666 TRAP-type uncharacterized transport system, fused permease components.
       0.722
NA2_01490
TRAP transporter solute receptor, TAXI family protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
       0.559
NA2_07002
Isomerase/hydrolase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
    
  0.546
NA2_14317
Maleylacetoacetate isomerase; COG0625 Glutathione S-transferase.
    
  0.544
NA2_01495
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
       0.476
NA2_01500
COG0824 Predicted thioesterase.
 
     0.442
NA2_16607
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.415
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.