STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_01639Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (396 aa)    
Predicted Functional Partners:
NA2_01874
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
 
 
 0.928
menC
Mandelate racemase/muconate lactonizing protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
    
  0.801
NA2_01629
COG1012 NAD-dependent aldehyde dehydrogenases.
       0.773
NA2_01644
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
    
  0.714
NA2_11400
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
  
 0.667
NA2_01599
COG2721 Altronate dehydratase.
 
 
 0.664
NA2_09091
COG0698 Ribose 5-phosphate isomerase RpiB.
   
 
  0.573
NA2_05813
Fructokinase; COG0524 Sugar kinases, ribokinase family.
    
 0.544
NA2_01649
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.540
NA2_01659
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
     0.444
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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