STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_01649TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component. (321 aa)    
Predicted Functional Partners:
NA2_01659
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
    0.902
NA2_01654
Tripartite ATP-independent periplasmic transporter DctQ; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
    0.884
NA2_01614
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
    0.820
NA2_01939
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
    0.815
NA2_01619
COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
    0.812
NA2_01584
TRAP dicarboxylate family transporter subunit DctQ; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
    0.785
NA2_11984
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
    0.773
NA2_01589
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
    0.769
NA2_10363
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
    0.769
NA2_13917
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
    0.769
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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