Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NA2_01774Oligopeptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (330 aa)    
Predicted Functional Partners:
NA2_01779
COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.906
NA2_01769
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  0.879
NA2_01764
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.857
NA2_11729
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.648
NA2_11804
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.647
NA2_01784
ABC di/oligopeptide transporter, periplasmic ligand binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  0.628
NA2_20457
Dipeptide transport ATP-binding protein DppF; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 
0.625
NA2_04501
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.604
NA2_11784
COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.598
NA2_12079
ABC di/oligopeptide transporter, ATPase subunit; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
0.595
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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