STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_02154COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (385 aa)    
Predicted Functional Partners:
NA2_02159
Binding-protein-dependent transport system inner membrane protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
  
  0.840
NA2_02149
Iron ABC transporter periplasmic protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
 
  0.796
NA2_02164
COG1737 Transcriptional regulators.
       0.752
NA2_14907
ABC transporter membrane spanning protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.731
NA2_02554
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
  0.709
NA2_14112
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components.
  
  0.707
NA2_14117
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
 0.699
ugpE
Sn-glycerol-3-phosphate transport system permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
  0.670
NA2_14902
CUT1 family carbohydrate ABC transporter membrane protein 1; COG1175 ABC-type sugar transport systems, permease components.
  
  0.665
NA2_12980
COG0395 ABC-type sugar transport system, permease component.
  
  0.656
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.