STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_02449Hypothetical protein. (147 aa)    
Predicted Functional Partners:
NA2_02444
Hypothetical protein; Belongs to the UPF0262 family.
 
     0.837
NA2_02439
Protein-tyrosine phosphatase, low molecular weight; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
     0.794
NA2_05186
2'-deoxycytidine 5'-triphosphate deaminase; COG0717 Deoxycytidine deaminase.
 
     0.762
NA2_05086
COG0642 Signal transduction histidine kinase.
  
     0.756
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
    0.739
NA2_05091
COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain.
  
     0.727
NA2_02604
COG0642 Signal transduction histidine kinase.
  
     0.716
NA2_12289
Hypothetical protein.
  
     0.701
hisS
COG0124 Histidyl-tRNA synthetase.
  
     0.691
NA2_03952
Metal dependent phosphohydrolase; COG1896 Predicted hydrolases of HD superfamily.
  
     0.665
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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