STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_02484PTS system lactose/cellobiose-specific transporter IIB; COG3414 Phosphotransferase system, galactitol-specific IIB component. (95 aa)    
Predicted Functional Partners:
NA2_02474
COG3775 Phosphotransferase system, galactitol-specific IIC component.
 
 
 0.988
NA2_02479
COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.982
srlE
PTS system glucitol/sorbitol-specific transporter subunit IIB; COG3732 Phosphotransferase system sorbitol-specific component IIBC.
 
     0.775
NA2_04696
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.771
srlA
PTS system glucitol/sorbitol-specific transporter subunit IIC; COG3730 Phosphotransferase system sorbitol-specific component IIC.
  
   
 0.771
NA2_10975
PTS system glucitol/sorbitol-specific transporter subunit IIA; COG3731 Phosphotransferase system sorbitol-specific component IIA.
 
     0.767
NA2_10980
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
  
 0.736
NA2_02194
COG4091 Predicted homoserine dehydrogenase.
  
     0.695
NA2_11689
COG4091 Predicted homoserine dehydrogenase.
  
     0.678
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
  
 
 0.674
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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