STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_03262Hypothetical protein. (394 aa)    
Predicted Functional Partners:
NA2_03267
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
   
 0.805
NA2_15993
Multi antimicrobial extrusion protein MatE; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.783
NA2_03287
O-antigen polymerase.
 
     0.779
NA2_20390
COG0726 Predicted xylanase/chitin deacetylase.
 
     0.767
NA2_08249
Peptidase A24A prepilin type IV; COG0084 Mg-dependent DNase.
  
     0.756
NA2_18535
Hypothetical protein.
  
     0.754
NA2_20163
Hypothetical protein.
 
     0.754
NA2_03277
COG0438 Glycosyltransferase.
  
     0.753
NA2_18555
Type IV pilus assembly PilZ.
  
     0.741
NA2_15839
Hpt domain-containing protein.
  
     0.733
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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