STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_03467COG1309 Transcriptional regulator. (238 aa)    
Predicted Functional Partners:
NA2_04236
Low temperature requirement A; COG4292 Predicted membrane protein.
  
     0.610
NA2_00610
COG1309 Transcriptional regulator.
  
     0.599
NA2_03482
Phosphonate-transporting ATPase; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
   
   0.589
NA2_03472
Putative efflux transporter; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.556
NA2_03477
Putative ABC transporter; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
       0.556
NA2_04886
Abortive infection protein.
  
     0.453
NA2_17946
Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.435
NA2_06263
COG1309 Transcriptional regulator.
  
     0.420
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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