STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_04351COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (318 aa)    
Predicted Functional Partners:
NA2_16717
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.769
NA2_05363
Regulatory protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.765
NA2_14857
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.720
NA2_08626
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.708
NA2_18730
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.692
NA2_04356
COG0388 Predicted amidohydrolase.
  
    0.554
NA2_04346
Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family.
       0.491
NA2_04341
Hypothetical protein.
       0.421
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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