STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_04476ABC transporter substrate binding protein (dipeptide); COG0747 ABC-type dipeptide transport system, periplasmic component. (514 aa)    
Predicted Functional Partners:
NA2_04466
Dipeptide-binding ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  
 
0.938
NA2_04491
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  
  0.938
NA2_04461
Binding-protein-dependent transport system inner membrane protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.811
NA2_04456
Binding-protein-dependent transporter inner membrane component family protein 10; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.795
NA2_04451
Dihydroorotase; COG3964 Predicted amidohydrolase.
 
     0.628
NA2_04471
Penicillin-binding protein; COG1680 Beta-lactamase class C and other penicillin binding proteins.
 
     0.621
NA2_07584
ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.617
NA2_07589
ABC transporter permease; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.557
NA2_12029
Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.522
NA2_01989
Family 5 extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.520
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.