STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_04491Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (552 aa)    
Predicted Functional Partners:
NA2_04476
ABC transporter substrate binding protein (dipeptide); COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  
  0.938
NA2_04466
Dipeptide-binding ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
  
  0.932
NA2_04496
Binding-protein-dependent transport system inner membrane protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.897
NA2_04501
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.896
NA2_04506
Peptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 
  0.819
NA2_04511
Putative peptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.782
NA2_04486
COG0642 Signal transduction histidine kinase.
 
     0.781
NA2_04516
GCN5-related N-acetyltransferase.
 
     0.741
NA2_04481
beta-N-acetylhexosaminidase; COG3525 N-acetyl-beta-hexosaminidase.
 
     0.605
NA2_11814
Protein CalT6; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
  0.512
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.