STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_07594ABC transporter substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (541 aa)    
Predicted Functional Partners:
NA2_07584
ABC transporter permease; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.892
NA2_07599
Hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
 
     0.892
NA2_07589
ABC transporter permease; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.888
NA2_09376
Carboxypeptidase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
  
     0.767
NA2_12089
Hypothetical protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.596
NA2_07579
ABC transporter ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
  0.580
NA2_07604
COG1414 Transcriptional regulator.
 
     0.540
NA2_12703
MlrC domain-containing protein; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.
  
     0.527
NA2_12753
MlrC domain-containing protein.
  
     0.527
NA2_12733
Microcystin LR degradation protein MlrC-like protein.
  
     0.512
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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