STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_08409COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (485 aa)    
Predicted Functional Partners:
NA2_20133
COG0067 Glutamate synthase domain 1.
  
 
 0.790
NA2_08419
Hydroxyproline-2-epimerase; COG3938 Proline racemase; Belongs to the proline racemase family.
   
  0.757
NA2_08414
FAD dependent oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating).
  
 
  0.753
NA2_04776
COG0281 Malic enzyme.
  
 
 0.729
NA2_15799
COG0281 Malic enzyme.
  
 
 0.729
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.694
NA2_14312
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.684
NA2_00780
Oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein; COG1600 Uncharacterized Fe-S protein.
   
 
 0.674
NA2_05271
Oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein; COG1600 Uncharacterized Fe-S protein.
   
 
 0.674
NA2_14372
Oxidoreductase, NAD-binding/iron-sulfur cluster-binding protein; COG1600 Uncharacterized Fe-S protein.
   
 
 0.674
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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