STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_08506Histidine-binding periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (279 aa)    
Predicted Functional Partners:
NA2_08501
COG4215 ABC-type arginine transport system, permease component.
 
  0.959
NA2_08496
COG4160 ABC-type arginine/histidine transport system, permease component.
 
  0.953
NA2_15629
Amino acid ABC transporter permease; COG4215 ABC-type arginine transport system, permease component.
  0.828
NA2_12778
Polar amino acid ABC transporter, inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 
  0.822
NA2_14177
COG0765 ABC-type amino acid transport system, permease component.
 
  0.821
NA2_14172
COG0765 ABC-type amino acid transport system, permease component.
 
  0.820
NA2_16747
ABC transporter permease; COG0765 ABC-type amino acid transport system, permease component.
 
  0.816
NA2_06957
Ectoine/hydroxyectoine ABC transporter permease EhuC; COG0765 ABC-type amino acid transport system, permease component.
 
  0.814
glnP
Glutamine ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
 
  0.814
NA2_15624
Polar amino acid ABC transporter inner membrane subunit; COG4160 ABC-type arginine/histidine transport system, permease component.
 
  0.811
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.