STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_08556Extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component. (452 aa)    
Predicted Functional Partners:
NA2_08561
Binding-protein-dependent transport systems inner membrane component; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.924
NA2_16452
COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.834
NA2_09171
Binding-protein-dependent transport systems inner membrane component; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
  0.815
NA2_02159
Binding-protein-dependent transport system inner membrane protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
  0.809
NA2_08566
ABC transporter related protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
  0.795
NA2_02009
Hypothetical protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
  0.750
NA2_08546
COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system.
 
  
  0.730
NA2_04137
Ferric iron ABC transporter permease; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
  0.723
NA2_08541
ABC transporter substrate binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
  
 
0.618
NA2_02004
Hypothetical protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
  0.613
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.