STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_08606Decarboxylase; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (227 aa)    
Predicted Functional Partners:
NA2_08601
Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.
 
  
 0.978
NA2_08596
Oxidoreductase protein; COG0346 Lactoylglutathione lyase and related lyases.
 
  
 0.972
NA2_08611
2-hydroxymuconic semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
 
  
  0.767
NA2_06328
Short chain dehydrogenase.
    
 0.716
NA2_15409
HpcH/HpaI aldolase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
    0.694
NA2_01739
HpcH/HpaI aldolase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
    0.685
NA2_09803
HpcH/HpaI aldolase; COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
    0.685
NA2_08616
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; COG3971 2-keto-4-pentenoate hydratase.
 
     0.668
NA2_00885
NADPH-dependent F420 reductase; COG2085 Predicted dinucleotide-binding enzymes.
    
  0.648
NA2_02529
Carbohydrate kinase; COG1070 Sugar (pentulose and hexulose) kinases; Belongs to the FGGY kinase family.
  
 
 0.641
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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