STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_08856COG0842 ABC-type multidrug transport system, permease component. (377 aa)    
Predicted Functional Partners:
NA2_08861
COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.998
NA2_03762
COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.953
NA2_15127
Daunorubicin resistance ABC transporter ATPase subunit; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.941
NA2_08866
Secretion protein HlyD family protein; COG0845 Membrane-fusion protein.
 
  
 0.918
NA2_04711
COG1137 ABC-type (unclassified) transport system, ATPase component.
   
  0.777
NA2_01704
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
      0.770
potA
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
  0.752
NA2_08871
COG1309 Transcriptional regulator.
 
     0.748
NA2_15819
ABC transporter ATP-binding protein; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
      0.679
NA2_13897
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
   
  0.670
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.