STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_08876Hypothetical protein. (271 aa)    
Predicted Functional Partners:
NA2_08881
COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
       0.776
NA2_02369
AsmA family protein; COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.504
NA2_08886
Cytochrome c oxidase subunit I; COG5473 Predicted integral membrane protein.
       0.490
NA2_08866
Secretion protein HlyD family protein; COG0845 Membrane-fusion protein.
 
     0.481
NA2_10798
COG3249 Uncharacterized protein conserved in bacteria.
  
     0.441
NA2_01005
3-hydroxyacyl-CoA dehydrogenase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
     0.429
NA2_08861
COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.420
NA2_08871
COG1309 Transcriptional regulator.
       0.410
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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