STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_10133Hypothetical protein; COG0740 Protease subunit of ATP-dependent Clp proteases. (277 aa)    
Predicted Functional Partners:
NA2_10128
Hypothetical protein.
 
     0.951
NA2_10123
Hypothetical protein.
       0.660
NA2_15062
Hypothetical protein.
  
     0.506
NA2_04416
Hypothetical protein.
  
     0.495
NA2_03137
COG3457 Predicted amino acid racemase.
  
     0.476
NA2_04486
COG0642 Signal transduction histidine kinase.
  
     0.468
NA2_10113
Hypothetical protein.
       0.447
NA2_10118
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.447
NA2_00050
Putative membrane Spanning protein; COG3103 SH3 domain protein.
  
    0.433
NA2_08464
COG5622 Protein required for attachment to host cells.
  
     0.419
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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