STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_10298Putative Peptide/nickel transport system substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (519 aa)    
Predicted Functional Partners:
NA2_10288
Dipeptide ABC transporter dipeptide-binding protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  0.885
NA2_10293
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  0.871
NA2_10278
Oligopeptide/dipeptide ABC transporter ATPase subunit; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.733
NA2_10283
Oligopeptide ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.718
NA2_04291
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.696
NA2_12034
Peptide ABC-transporter permease; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.680
NA2_12039
Binding-protein-dependent transporters inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.679
NA2_07157
Binding-protein-dependent transport system inner membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; overlaps another CDS with the same product name.
 
  0.675
NA2_12688
Binding-protein-dependent transport system inner membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.675
NA2_17771
Binding-protein-dependent transport system inner membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.666
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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