STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_10318Dehydrogenase; COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit. (567 aa)    
Predicted Functional Partners:
sdhB
COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.996
NA2_10108
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
 0.996
NA2_14312
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.978
NA2_10103
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
  
 0.935
NA2_17374
Hypothetical protein.
  
 0.927
NA2_02184
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 0.907
NA2_13677
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 0.907
sucA
COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
  
 0.905
gltA
COG0372 Citrate synthase; Belongs to the citrate synthase family.
  
 0.883
NA2_18916
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.879
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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