STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_10503Hypothetical protein. (177 aa)    
Predicted Functional Partners:
NA2_08234
TadE-like protein.
  
     0.760
NA2_08229
COG4961 Flp pilus assembly protein TadG.
  
     0.759
NA2_08249
Peptidase A24A prepilin type IV; COG0084 Mg-dependent DNase.
  
     0.749
NA2_08269
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.743
NA2_03932
Hypothetical protein.
  
     0.741
NA2_08239
COG4964 Flp pilus assembly protein, secretin CpaC.
  
     0.736
NA2_08264
Pilus assembly protein cpaD.
  
     0.735
NA2_05588
Hypothetical protein.
  
     0.734
NA2_08289
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.732
NA2_18555
Type IV pilus assembly PilZ.
  
     0.725
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.