STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_11769COG1402 Uncharacterized protein, putative amidase. (258 aa)    
Predicted Functional Partners:
NA2_10268
Creatininase; COG1402 Uncharacterized protein, putative amidase.
  
     0.774
NA2_13737
Creatininase; COG1402 Uncharacterized protein, putative amidase.
  
     0.765
NA2_11774
COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
       0.615
NA2_05131
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
  
 0.609
NA2_11764
COG1402 Uncharacterized protein, putative amidase.
 
    
0.573
NA2_17636
Cytosine deaminase-like protein; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
 
  
  0.474
NA2_01604
Xylose isomerase; COG1082 Sugar phosphate isomerases/epimerases.
 
 
  0.443
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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