STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_11864COG1802 Transcriptional regulators. (236 aa)    
Predicted Functional Partners:
NA2_10553
COG1802 Transcriptional regulators.
  
     0.774
NA2_02019
COG1802 Transcriptional regulators.
  
     0.773
NA2_16752
Hypothetical protein; COG1802 Transcriptional regulators.
  
     0.773
NA2_08521
Putative GntR family transcriptional regulator; COG1802 Transcriptional regulators.
  
     0.771
NA2_06937
COG1802 Transcriptional regulators.
  
     0.766
NA2_01664
COG2186 Transcriptional regulators.
  
    0.638
NA2_02684
COG2186 Transcriptional regulators.
  
    0.604
NA2_11859
Class I and II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
  
    0.591
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.