STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_11969COG0789 Predicted transcriptional regulators. (145 aa)    
Predicted Functional Partners:
NA2_11964
MFS transporter; COG0477 Permeases of the major facilitator superfamily.
       0.773
NA2_03642
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
    
 0.651
NA2_13672
Hypothetical protein; COG2199 FOG: GGDEF domain.
    
 0.651
NA2_16098
Diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
    
 0.651
NA2_04776
COG0281 Malic enzyme.
    
  0.650
NA2_15799
COG0281 Malic enzyme.
    
  0.650
NA2_05728
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit; overlaps another CDS with the same product name.
     
 0.644
NA2_05733
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit; overlaps another CDS with the same product name.
     
 0.644
NA2_20133
COG0067 Glutamate synthase domain 1.
     
 0.644
NA2_05958
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
    
 0.634
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
Server load: low (24%) [HD]