STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_12823Hypothetical protein; COG1737 Transcriptional regulators. (307 aa)    
Predicted Functional Partners:
NA2_12818
Hypothetical protein.
 
     0.864
glnP
Glutamine ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
 
    0.769
NA2_16482
COG1737 Transcriptional regulators.
  
     0.755
glnQ
Glutamine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
  
    0.738
NA2_04127
COG1737 Transcriptional regulators.
  
     0.727
NA2_02164
COG1737 Transcriptional regulators.
  
     0.708
glnH
Glutamine ABC transporter periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
     0.632
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.415
NA2_20248
COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
 0.412
NA2_12828
COG1132 ABC-type multidrug transport system, ATPase and permease components.
       0.404
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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