STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_13100Iron-chelator utilization protein; COG2375 Siderophore-interacting protein. (248 aa)    
Predicted Functional Partners:
NA2_18220
Type I secretion system ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
   
  0.918
NA2_20901
Peptide-transporting ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
   
  0.918
NA2_13080
ABC transporter substrate-binding protein; COG4558 ABC-type hemin transport system, periplasmic component.
 
    0.781
NA2_13095
O-methyltransferase family protein; COG4122 Predicted O-methyltransferase.
       0.716
NA2_13090
ABC transporter-like protein; COG4559 ABC-type hemin transport system, ATPase component.
  
  
 0.672
NA2_13085
FecCD family transmembrane transport protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.668
NA2_13075
TonB-dependent receptor, plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.520
NA2_13105
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.438
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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