STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_13310COG2261 Predicted membrane protein. (94 aa)    
Predicted Functional Partners:
NA2_13300
Cyclase/dehydrase; COG2867 Oligoketide cyclase/lipid transport protein.
       0.800
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.800
NA2_13315
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
       0.603
NA2_04576
COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
  
  
 0.553
NA2_17696
COG3279 Response regulator of the LytR/AlgR family.
   
    0.480
NA2_13325
Lipolytic protein G-D-S-L; COG2755 Lysophospholipase L1 and related esterases.
       0.460
NA2_13320
Hypothetical protein.
  
    0.446
NA2_13335
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
       0.433
NA2_17222
Periplasmic sensor hybrid histidine kinase; COG0591 Na+/proline symporter.
  
  
 0.425
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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