STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_13692Twin-arginine translocation pathway signal; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (362 aa)    
Predicted Functional Partners:
NA2_10403
COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
    0.777
NA2_13687
C4 dicarboxylate transporter permease; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
    0.777
NA2_10408
TRAP dicarboxylate transporter subunit DctQ; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.776
NA2_13682
Tripartite ATP-independent periplasmic transporter DctQ; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.776
NA2_10338
C4-dicarboxylate transporter family protein subunit DctM; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
    0.775
NA2_13702
TRAP mannitol/C4-dicarboxylate transporter; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
  
    0.770
NA2_10333
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.766
NA2_13697
COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.761
NA2_10328
TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.485
NA2_13707
Solute-binding component of transporter; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.426
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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