STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_13897COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (333 aa)    
Predicted Functional Partners:
NA2_13887
COG0395 ABC-type sugar transport system, permease component.
 
  0.934
NA2_14907
ABC transporter membrane spanning protein; COG0395 ABC-type sugar transport system, permease component.
 
  0.850
NA2_14117
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
 0.846
NA2_02554
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
  0.845
NA2_14112
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components.
  
  0.833
NA2_12980
COG0395 ABC-type sugar transport system, permease component.
  
  0.826
NA2_14902
CUT1 family carbohydrate ABC transporter membrane protein 1; COG1175 ABC-type sugar transport systems, permease components.
  
  0.823
NA2_02564
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components.
  
  0.813
NA2_12985
ABC transporter permease; COG1175 ABC-type sugar transport systems, permease components.
  
  0.811
NA2_13882
COG1175 ABC-type sugar transport systems, permease components.
 
  0.807
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.