STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_14302Hypothetical protein; COG1686 D-alanyl-D-alanine carboxypeptidase. (151 aa)    
Predicted Functional Partners:
NA2_14307
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.888
NA2_14352
Extracellular solute-binding protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
    0.782
NA2_14457
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
    0.782
NA2_08636
Hypothetical protein.
  
     0.768
NA2_08631
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
    0.757
NA2_05256
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.738
NA2_00850
Tripartite AtP-independent periplasmic transporter subunit DctQ.
  
     0.654
NA2_01425
Hypothetical protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
    0.630
NA2_05261
TRAP transporter solute receptor; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
    0.575
NA2_14467
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
  
  0.557
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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