STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_14422Cyclase family protein; COG1878 Predicted metal-dependent hydrolase. (274 aa)    
Predicted Functional Partners:
NA2_14427
Short-chain dehydrogenase/reductase SDR; COG1545 Predicted nucleic-acid-binding protein containing a Zn-ribbon.
 
     0.951
NA2_14442
Benzoate 1,2-dioxygenase subunit beta; COG5517 Small subunit of phenylpropionate dioxygenase.
 
     0.939
NA2_14447
Benzoate 1,2-dioxygenase subunit alpha; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
     0.939
NA2_14432
Nonspecific lipid-transfer protein; COG0183 Acetyl-CoA acetyltransferase.
 
     0.935
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.934
NA2_14417
3-oxoacyl-ACP reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    0.910
NA2_14437
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
  
  0.906
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
 0.844
NA2_09693
Indolepyruvate oxidoreductase subunit B; COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
 
  
  0.804
NA2_09688
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
 
     0.779
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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