STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_14527Putative peptide-binding periplasmic ABC transporter protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (542 aa)    
Predicted Functional Partners:
NA2_14522
Hypothetical protein; COG2421 Predicted acetamidase/formamidase.
 
     0.940
NA2_14532
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.930
NA2_14537
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  0.925
NA2_14542
COG3707 Response regulator with putative antiterminator output domain.
 
     0.911
NA2_14547
Putative regulator protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
    0.847
NA2_14517
ABC transporter-like protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
  0.807
NA2_14577
Sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
    
  0.527
NA2_17751
Dipeptide-binding ABC transporter substrate-binding protein component; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.524
NA2_20407
Extracellular solute-binding protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
  
 
 
0.510
NA2_10298
Putative Peptide/nickel transport system substrate-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.497
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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