STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_14592COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (290 aa)    
Predicted Functional Partners:
NA2_11215
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.735
NA2_04246
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
NA2_07909
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.634
NA2_05393
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.569
NA2_14587
Putative NAD(P)H dehydrogenase (quinone); COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).
       0.553
NA2_15474
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.538
NA2_02569
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.480
NA2_16717
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.429
NA2_10995
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.423
NA2_14892
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.418
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.