STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_15207Hypothetical protein; COG0438 Glycosyltransferase. (316 aa)    
Predicted Functional Partners:
NA2_15277
Glycosyl transferase family protein; COG5597 Alpha-N-acetylglucosamine transferase.
   
 0.846
NA2_15212
COG0438 Glycosyltransferase.
       0.776
greA
Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.
       0.771
NA2_05848
COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.731
NA2_03282
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.586
NA2_18500
COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.474
NA2_15202
FkbM family methyltransferase; COG0500 SAM-dependent methyltransferases.
     
 0.458
NA2_15197
COG0438 Glycosyltransferase.
       0.447
NA2_07914
COG1073 Hydrolases of the alpha/beta superfamily.
    
   0.412
NA2_07919
COG1073 Hydrolases of the alpha/beta superfamily.
    
   0.412
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.