STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_15514Peptidase M48 Ste24p; COG0501 Zn-dependent protease with chaperone function. (341 aa)    
Predicted Functional Partners:
NA2_15509
COG4269 Predicted membrane protein.
 
     0.892
NA2_11310
Peptidase M23B; COG4942 Membrane-bound metallopeptidase.
   
 
 0.871
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.717
NA2_17222
Periplasmic sensor hybrid histidine kinase; COG0591 Na+/proline symporter.
    
 0.684
NA2_05958
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
     
 0.655
NA2_16832
Hypothetical protein; COG0457 FOG: TPR repeat.
 
  
 0.629
NA2_21003
Multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA; COG0642 Signal transduction histidine kinase.
  
  
 0.601
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
   
 
 0.583
NA2_11020
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.560
NA2_05141
Phosphate regulon, two-component sensor histidine kinase, phoR; COG0642 Signal transduction histidine kinase.
    
  0.557
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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