STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_15629Amino acid ABC transporter permease; COG4215 ABC-type arginine transport system, permease component. (237 aa)    
Predicted Functional Partners:
NA2_15624
Polar amino acid ABC transporter inner membrane subunit; COG4160 ABC-type arginine/histidine transport system, permease component.
 
 
0.942
NA2_15634
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  0.908
glnH
Glutamine ABC transporter periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
  0.898
NA2_19216
Extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  0.839
NA2_17187
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
  0.834
NA2_08506
Histidine-binding periplasmic protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
  0.828
NA2_14167
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  0.800
NA2_05121
Family 3 extracellular solute-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  0.779
NA2_12648
COG1126 ABC-type polar amino acid transport system, ATPase component.
  
  0.773
NA2_14162
Glutamine transport ATP-binding protein GlnQ 4; COG1126 ABC-type polar amino acid transport system, ATPase component.
  
  0.765
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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