STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_16033DNA-3-methyladenine glycosidase II; COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase. (214 aa)    
Predicted Functional Partners:
NA2_13927
methylated-DNA--protein- cysteinemethyltransferase; COG2169 Adenosine deaminase.
 
 
 0.919
NA2_00765
Endonuclease/exonuclease/phosphatase.
   
 0.800
NA2_10038
COG0708 Exonuclease III.
   
 0.800
NA2_19151
Hypothetical protein; COG0708 Exonuclease III.
   
 0.800
NA2_20395
COG0708 Exonuclease III.
   
 0.800
NA2_15137
COG0350 Methylated DNA-protein cysteine methyltransferase.
 
 
 0.682
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.623
NA2_16038
glutamyl-Q tRNA(Asp) ligase; COG0008 Glutamyl- and glutaminyl-tRNA synthetases; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.602
NA2_16028
COG1403 Restriction endonuclease.
 
     0.581
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
    
 
 0.534
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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