STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_16073COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). (255 aa)    
Predicted Functional Partners:
tatA
Twin arginine translocase protein A; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.877
NA2_18640
COG0860 N-acetylmuramoyl-L-alanine amidase.
  
   0.867
NA2_20178
Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
 0.761
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.730
NA2_00635
HflK protein; HflC and HflK could encode or regulate a protease.
   
 0.724
NA2_00640
ftsH protease activity modulator hflC; HflC and HflK could regulate a protease.
   
 0.724
NA2_20335
COG1826 Sec-independent protein secretion pathway components.
   
 
 0.719
NA2_16063
Hypothetical protein.
       0.682
NA2_16068
Hypothetical protein; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.682
NA2_16058
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.578
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.