STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_16947Hypothetical protein. (282 aa)    
Predicted Functional Partners:
NA2_12618
Cupin.
  
    0.749
NA2_16937
Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.725
NA2_16942
COG1737 Transcriptional regulators.
 
     0.719
NA2_09673
Hypothetical protein; COG1878 Predicted metal-dependent hydrolase.
  
    0.668
NA2_14422
Cyclase family protein; COG1878 Predicted metal-dependent hydrolase.
  
    0.668
NA2_15257
Thioesterase superfamily protein; COG1607 Acyl-CoA hydrolase.
    
  0.655
tdh
L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.
    
  0.655
NA2_00915
Glutaconate CoA-transferase; COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit.
    
 0.583
NA2_13832
Coenzyme A transferase; COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; overlaps another CDS with the same product name.
    
 0.583
NA2_00580
Hypothetical protein; COG0824 Predicted thioesterase.
 
 
 0.582
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.