STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_18205Transglutaminase family protein cysteine peptidase BTLCP; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. (218 aa)    
Predicted Functional Partners:
NA2_18225
COG1538 Outer membrane protein.
 
   
 0.805
NA2_18220
Type I secretion system ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
   
 0.779
NA2_18215
COG0845 Membrane-fusion protein.
 
     0.745
NA2_05958
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 
 
 0.641
NA2_01524
COG2931 RTX toxins and related Ca2+-binding proteins.
  
   
 0.633
NA2_20896
COG0845 Membrane-fusion protein.
 
  
 0.625
NA2_18200
Hemolysin-type calcium-binding region; COG2931 RTX toxins and related Ca2+-binding proteins.
 
   
 0.584
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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