STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_18375Monosaccharide-transporting ATPase; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; overlaps another CDS with the same product name. (329 aa)    
Predicted Functional Partners:
NA2_18370
COG1129 ABC-type sugar transport system, ATPase component; overlaps another CDS with the same product name.
 0.985
NA2_18365
Putative sugar ABC transporter periplasmic sugar-binding protein ABC transporter; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.966
NA2_06343
COG1129 ABC-type sugar transport system, ATPase component.
 0.931
NA2_03132
ABC transporter-like protein; COG1129 ABC-type sugar transport system, ATPase component.
 0.926
NA2_18385
COG1609 Transcriptional regulators.
 
 
  0.915
NA2_03147
Periplasmic binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.879
NA2_03152
Periplasmic binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.855
NA2_18390
COG0673 Predicted dehydrogenases and related proteins.
 
    0.846
NA2_18380
Monosaccharide-transporting ATPase; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; overlaps another CDS with the same product name.
 
    
0.842
NA2_06333
Periplasmic binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.769
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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