STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_18655COG0739 Membrane proteins related to metalloendopeptidases. (432 aa)    
Predicted Functional Partners:
NA2_04191
COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
     0.671
NA2_18645
COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
   
 0.586
NA2_05583
Penicillin-binding protein; COG0744 Membrane carboxypeptidase (penicillin-binding protein).
  
     0.584
NA2_18660
Bacterioferritin comigratory protein; COG1225 Peroxiredoxin.
  
  
 0.555
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
     0.502
NA2_04002
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.478
NA2_11310
Peptidase M23B; COG4942 Membrane-bound metallopeptidase.
 
   
 0.469
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
   
 0.421
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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