STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_19903Phage major capsid protein E. (343 aa)    
Predicted Functional Partners:
NA2_19923
Lambda family phage portal protein; COG5511 Bacteriophage capsid protein.
 
    0.894
NA2_19933
Terminase GpA; COG5525 Bacteriophage tail assembly protein.
 
    0.703
NA2_19908
Hypothetical protein; COG0480 Translation elongation factors (GTPases).
  
    0.656
NA2_19918
Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class).
 
    0.647
NA2_19898
Hypothetical protein.
       0.550
NA2_19913
Hypothetical protein.
       0.494
NA2_19943
Hypothetical protein.
 
     0.442
NA2_19938
Hypothetical protein.
  
    0.430
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.