Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
NA2_19908 | NA2_19913 | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | Hypothetical protein. | 0.627 |
NA2_19908 | NA2_19918 | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | 0.566 |
NA2_19908 | NA2_19923 | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | Lambda family phage portal protein; COG5511 Bacteriophage capsid protein. | 0.586 |
NA2_19908 | NA2_19928 | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | Head-to-tail joining protein W gpW family protein. | 0.502 |
NA2_19908 | NA2_19933 | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | Terminase GpA; COG5525 Bacteriophage tail assembly protein. | 0.843 |
NA2_19908 | NA2_19938 | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | Hypothetical protein. | 0.837 |
NA2_19913 | NA2_19908 | Hypothetical protein. | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | 0.627 |
NA2_19913 | NA2_19918 | Hypothetical protein. | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | 0.719 |
NA2_19913 | NA2_19923 | Hypothetical protein. | Lambda family phage portal protein; COG5511 Bacteriophage capsid protein. | 0.740 |
NA2_19913 | NA2_19928 | Hypothetical protein. | Head-to-tail joining protein W gpW family protein. | 0.639 |
NA2_19913 | NA2_19933 | Hypothetical protein. | Terminase GpA; COG5525 Bacteriophage tail assembly protein. | 0.649 |
NA2_19913 | NA2_19938 | Hypothetical protein. | Hypothetical protein. | 0.633 |
NA2_19913 | NA2_19943 | Hypothetical protein. | Hypothetical protein. | 0.433 |
NA2_19918 | NA2_19908 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Hypothetical protein; COG0480 Translation elongation factors (GTPases). | 0.566 |
NA2_19918 | NA2_19913 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Hypothetical protein. | 0.719 |
NA2_19918 | NA2_19923 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Lambda family phage portal protein; COG5511 Bacteriophage capsid protein. | 0.893 |
NA2_19918 | NA2_19928 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Head-to-tail joining protein W gpW family protein. | 0.671 |
NA2_19918 | NA2_19933 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Terminase GpA; COG5525 Bacteriophage tail assembly protein. | 0.804 |
NA2_19918 | NA2_19938 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Hypothetical protein. | 0.679 |
NA2_19918 | NA2_19943 | Peptidase S49; COG0616 Periplasmic serine proteases (ClpP class). | Hypothetical protein. | 0.424 |
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