STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_20003COG3750 Uncharacterized protein conserved in bacteria; Belongs to the UPF0335 family. (128 aa)    
Predicted Functional Partners:
NA2_00605
COG3814 Uncharacterized protein conserved in bacteria.
  
   
 0.779
NA2_19998
DNA methylase N-4/N-6 domain-containing protein; COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.773
NA2_03677
COG2927 DNA polymerase III, chi subunit.
  
     0.740
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.726
NA2_09398
DNA helicase/exodeoxyribonuclease V subunit B; COG3893 Inactivated superfamily I helicase.
  
     0.713
NA2_11085
Putative cytoplasmic protein; COG3820 Uncharacterized protein conserved in bacteria.
  
   
 0.713
NA2_08179
COG3807 Uncharacterized protein conserved in bacteria.
  
     0.695
NA2_20958
COG0625 Glutathione S-transferase.
  
     0.662
NA2_05638
MucR family transcriptional regulator.
  
     0.655
NA2_19026
Hypothetical protein.
  
     0.626
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.