STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_20462COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (289 aa)    
Predicted Functional Partners:
NA2_20467
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.957
NA2_20457
Dipeptide transport ATP-binding protein DppF; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 
0.944
NA2_20472
Nickel-transporting ATPase; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.931
NA2_20477
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
  0.821
NA2_09658
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
   
 
  0.677
NA2_11729
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.603
NA2_12039
Binding-protein-dependent transporters inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.570
NA2_04456
Binding-protein-dependent transporter inner membrane component family protein 10; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.568
NA2_11804
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.522
NA2_13992
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
  0.511
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.