Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NA2_20522COG3827 Uncharacterized protein conserved in bacteria. (225 aa)    
Predicted Functional Partners:
NA2_09628
Chromosome segregation DNA-binding protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
    
 
 0.795
NA2_05096
Peptidase S24/S26A/S26B, conserved region; COG2932 Predicted transcriptional regulator; Belongs to the peptidase S24 family.
  
     0.684
NA2_15419
Hypothetical protein.
  
     0.625
NA2_05998
Hypothetical protein.
  
     0.610
NA2_20527
COG1538 Outer membrane protein.
       0.569
NA2_18600
COG4765 Uncharacterized protein conserved in bacteria.
  
     0.559
NA2_11300
COG2861 Uncharacterized protein conserved in bacteria.
  
     0.554
NA2_10503
Hypothetical protein.
  
     0.542
NA2_03327
Ubiquinol-cytochrome C chaperone.
  
     0.530
NA2_09583
PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
    
   0.490
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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