STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NA2_21008Hypothetical protein. (140 aa)    
Predicted Functional Partners:
NA2_15374
Hypothetical protein.
  
     0.722
NA2_11430
Hypothetical protein.
 
     0.714
NA2_18146
Hypothetical protein.
  
     0.712
NA2_03507
COG4391 Uncharacterized protein conserved in bacteria.
  
     0.695
NA2_21003
Multi-sensor hybrid histidine kinase / cell cycle control histidine kinase CckA; COG0642 Signal transduction histidine kinase.
 
   
 0.684
NA2_04686
Hypothetical protein.
  
     0.671
NA2_06033
Invasion associated locus B.
  
     0.661
NA2_09413
COG0642 Signal transduction histidine kinase.
  
     0.648
NA2_04072
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.638
NA2_15834
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.633
Your Current Organism:
Nitratireductor pacificus
NCBI taxonomy Id: 391937
Other names: N. pacificus pht-3B, Nitratireductor pacificus pht-3B, Nitratireductor sp. pht-3B
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